Forrest logo
back to context overview

snakefmt

List of commands for snakefmt:

  • snakefmt:tldr:4f474 snakefmt: Display the changes that would be performed without performing them (dry-run).
    $ snakefmt --diff ${path-to-snakefile}
    try on your machine
    explain this command
  • snakefmt:tldr:4f773 snakefmt: Format a file using a specific maximum line length.
    $ snakefmt --line-length ${100} ${path-to-snakefile}
    try on your machine
    explain this command
  • snakefmt:tldr:ab294 snakefmt: Format a specific Snakefile.
    $ snakefmt ${path-to-snakefile}
    try on your machine
    explain this command
  • snakefmt:tldr:e7e75 snakefmt: Format a file using a specific configuration file.
    $ snakefmt --config ${path-to-config-toml} ${path-to-snakefile}
    try on your machine
    explain this command
back to context overview